@include "rna/_cr_ana_stages.mro"

call RUN_GRAPH_CLUSTERING_NG as RUN_GRAPH_CLUSTERING(
    matrix_h5        = "/data/adf/meeting_prep/glyma.nodule_multiome/Nodule_1gex_only/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/PREPROCESS_MATRIX/fork0/join-u9474a46be7/files/preprocessed_matrix_h5.h5",
    pca_h5           = "/data/adf/meeting_prep/glyma.nodule_multiome/Nodule_1gex_only/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_PCA/fork0/join-u9474a46bec/files/pca_h5.h5",
    num_neighbors    = null,
    neighbor_a       = null,
    neighbor_b       = null,
    input_pcs        = null,
    resolution       = null,
    random_seed      = null,
    is_antibody_only = false,
    threads          = 4,
)
