@include "rna/_cr_ana_stages.mro"

call RUN_UMAP_NG as RUN_UMAP(
    matrix_h5        = "/data/adf/meeting_prep/glyma.nodule_multiome/Nodule_2_gex_only/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/PREPROCESS_MATRIX/fork0/join-ua092a47512/files/preprocessed_matrix_h5.h5",
    pca_h5           = "/data/adf/meeting_prep/glyma.nodule_multiome/Nodule_2_gex_only/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/RUN_PCA/fork0/join-ua092a4751a/files/pca_h5.h5",
    random_seed      = null,
    n_neighbors      = null,
    input_pcs        = null,
    max_dims         = null,
    min_dist         = null,
    metric           = null,
    is_antibody_only = false,
)
