{
  "args": {
    "dedup": false,
    "fasta": "./genome.fa",
    "gtf": "./genes.gtf",
    "keep_duplicates": false,
    "output": "./williams82_v3",
    "overwrite": false,
    "sparse": false,
    "spliced": null,
    "threads": 32,
    "unspliced": null
  },
  "command": "index",
  "t2g_file": "./williams82_v3/ref/t2g_3col.tsv",
  "version_info": {
    "alevin_fry": {
      "exe_path": "/home/ctc/miniconda3/envs/af/bin/alevin-fry",
      "version": "0.8.2"
    },
    "piscem": {
      "exe_path": "/home/ctc/miniconda3/envs/af/bin/piscem",
      "version": "0.6.0"
    },
    "salmon": {
      "exe_path": "/home/ctc/miniconda3/envs/af/bin/salmon",
      "version": "1.10.2"
    }
  }
}